CDS

Accession Number TCMCG007C33050
gbkey CDS
Protein Id XP_018514773.1
Location 21558633..21561203
Gene LOC103869581
GeneID 103869581
Organism Brassica rapa

Protein

Length 856aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_018659257.2
Definition AP-3 complex subunit delta [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category U
Description Part of the AP-3 complex, an adaptor-related complex which seems to be clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane and may be directly involved in trafficking to the vacuole. It also function in maintaining the identity of lytic vacuoles and in regulating the transition between storage and lytic vacuoles
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
KEGG_ko ko:K12396        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04142        [VIEW IN KEGG]
map04142        [VIEW IN KEGG]
GOs GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005794        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0006903        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007032        [VIEW IN EMBL-EBI]
GO:0007033        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010256        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016050        [VIEW IN EMBL-EBI]
GO:0016192        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051640        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051648        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0051650        [VIEW IN EMBL-EBI]
GO:0051656        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080171        [VIEW IN EMBL-EBI]
GO:1990019        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGTCTTCAAACTCCCTCATGGACAGCTTGTTCCAGCGCAGCCTCGAGGATCTGATCAAAGGCCTACGCCTCGGAGAATCCACCTTCATCTCCAGATCCCTAGAAGAAATCCGCCGCGAGATCAAGCTGACGGATCTCTCCACCAAATCCGTCGCCCTCCAGAAACTCTCCTACCTCGCCGCGCTCCACGGCGTCGACATGGCCTGGGCGGCGTTCCACGCCGTGGAGGTCGTTTCCTCATCTCGATTCGCGCACAAGAGGATCGGTTACCACGCGATTGCTCAGTCGTTCAGCGATCAGACGCCGGTTATGCTTCTGATCACGAACCAGCTCAGGAAGGATCTGAATAGTTCGAACGAGCACGAGGTGAGTCTCGCTCTTGAATGTTTGGCTAGGATTGGGACTGATGATCTAGCTAGGGATTTGACCTCTGAGGTGTTTACGCTGTTAGGTAGTAGTAAGGCTTTGGTTAGGAAGAAAGCTATAGGTGTGGTTTTGAGAGTTTTCGATAAGTATCCTGACGCTGTTAAGGTATGTTTCAAGCGTCTCGTTGAGAATCTTGAGAGCTCTGATCCTCAGCTTCTATCAGCTGTGGTTGGAGTGTTCTGTGAACTCACAGCAAAGGATCCAAGATCTTATCTTCCCTTAGCTCCAGAGTTTTACAAGATTCTGGTTGATTCGAGGAACAATTGGGTTTTGATCAAGGTTCTTAAGATATTTGCTAAATTGGCTTCGATTGAGCCTAGGTTGGCTAAGAAGGTGGCTGATCCGGTCTGTGAGCATATGAGGAAACAGAATGTGGGGAAGTCTTTGTTGTTTGAGTGTATTAGAACCGTGTTTAGTAGCTTGAGCGATCAGGAAACAGCTTTGAAGCTCGCGGTTGCTAAGATTAGGGAGTTTCTTGTGGATGATGATCCGAATCTCAAGTATCTCGGTCTTCATGCGTTGTCGATTGTTGCTCCAAAGCATTTGTGGGCTGTTTTGGAGAACAAAGAAGCTGTTGTGAAGGCTATGAGCGATGAGGATCCGAATGTTAAACTCGAGGCTTTGCATCTTTTAATGGCAATGGTGAATGAAGATAACGTGACTGAGATATCCCGGATTCTGATGAACTATGCGCTAAAGTCTGACCCTTTGTTCTGCAACGAGATTATTTGTTCCGTTCTACTGCCATGCTCGAGGAACTCGTATGAGATCATAGTTGACTTCGATTGGTACTTGTCTCTTCTCGGTGAAATGGCTAGAGTCCCACATTGTCAAAGAGGGAAAGAAATTGAGCATCAGTTGATTGATATCGGTACGAGGGTCAAAGATGCTAGACTGGAGCTAGTTCGGGTTTCTAGAGCGCTGCTTATCGATCCTGCATTGCTTGGTAATCAGTTCTTGTATCCGATTTTATCCGCAGCTGCTTGGGCTTCAGGGGAATATGTCGAGTTCTCTAAGTCCCCTTATGAGATTGCAGAGGCGCTTCTGCAACCACGTACTTGTCTCTTACCAGATTCAATTAGAGCAATCTACATACATTCAGCTTTCAAAGTTCTTGTCTTTAGTCTCGGGGCATACTTCTCAGCCCAGCAGCCCACTTCCCCGCCCTTGGCTCAGGAGTCTACCAGCTCTGGTCATTCAATGGTGAATGGTTTCACATACAACTCCATATCGAGTCTGGTGAATATGATTGAGTTGGGATTGTGCTCGTTATCCGGAACCATAGACGTGGAAGTGCAAGAGAGAGCTAAGAACATTCTAGGATTCATTGGTATGATAAAACATGAAATAGCTGAGAAAGCAACCTCACAAAACAGTGAAACAGAAGGTCATAGAGCTATAGCATTCATGGAAGATGTCTTCTCAGAAGAGCTTGGCCCTGTTTCTTCAACTGCACAAGAAAAAGTTCCTCTACCAGAAGGGTTAGAGCTGAATGAGAATCTTGAAGGTTTACAAGAGATTTGCAGAGAAGTTCTCGAACCAATGGCGGAATCAGATTACTCCTCAGACAAAGTCAGCTTCTCTGTCGCCAAACTCAGAATCAGAGATCAAGAAGAAGCCTCATCGTCTTTACCTCCTCCACTTGAATCTTCATCCTTACTCGCAGAACACAGAAAGCGCCATGGACTGTACTATCTCTCCTCTCAGAAAAGCGAAGACCACAACGACAGAGAAGGCAACGATAACAACACGTCAAACGAATACCCACCAGCGAATGAGATATCTGTGGACTCGTTTAAACCCAAGAAAAAGATATCAAAACCAAGACCTGTAGTGGTGAAACTGGATGAAGGAGATGAACCAAAGAGAAAGCCAGACGCTAGTAGTAGTAACGATGAGTCTTTGTCACGTGCCATCCAAACCGCTCTTATGGGGAAAGGGAAAGGCAAGGAGAAGGAGAAGGAAATTGTAAAAGAGAACCACGAGATGAATGTTGATACAGAGAACATCGAACAGAGCTCAAGAAGAGAGAAGAAGAATAAGAAAAATGGTGAGAGAAGTAGTAAGCGTAGTTCACGACGGCAAAGAGGCAAAGAAGCAAGTGTAACAAAACCAGTCGAAGTCCCAGATTTGCTCTTATGA
Protein:  
MASSNSLMDSLFQRSLEDLIKGLRLGESTFISRSLEEIRREIKLTDLSTKSVALQKLSYLAALHGVDMAWAAFHAVEVVSSSRFAHKRIGYHAIAQSFSDQTPVMLLITNQLRKDLNSSNEHEVSLALECLARIGTDDLARDLTSEVFTLLGSSKALVRKKAIGVVLRVFDKYPDAVKVCFKRLVENLESSDPQLLSAVVGVFCELTAKDPRSYLPLAPEFYKILVDSRNNWVLIKVLKIFAKLASIEPRLAKKVADPVCEHMRKQNVGKSLLFECIRTVFSSLSDQETALKLAVAKIREFLVDDDPNLKYLGLHALSIVAPKHLWAVLENKEAVVKAMSDEDPNVKLEALHLLMAMVNEDNVTEISRILMNYALKSDPLFCNEIICSVLLPCSRNSYEIIVDFDWYLSLLGEMARVPHCQRGKEIEHQLIDIGTRVKDARLELVRVSRALLIDPALLGNQFLYPILSAAAWASGEYVEFSKSPYEIAEALLQPRTCLLPDSIRAIYIHSAFKVLVFSLGAYFSAQQPTSPPLAQESTSSGHSMVNGFTYNSISSLVNMIELGLCSLSGTIDVEVQERAKNILGFIGMIKHEIAEKATSQNSETEGHRAIAFMEDVFSEELGPVSSTAQEKVPLPEGLELNENLEGLQEICREVLEPMAESDYSSDKVSFSVAKLRIRDQEEASSSLPPPLESSSLLAEHRKRHGLYYLSSQKSEDHNDREGNDNNTSNEYPPANEISVDSFKPKKKISKPRPVVVKLDEGDEPKRKPDASSSNDESLSRAIQTALMGKGKGKEKEKEIVKENHEMNVDTENIEQSSRREKKNKKNGERSSKRSSRRQRGKEASVTKPVEVPDLLL